Journal: Nature Communications
Article Title: Quinolinate promotes macrophage-induced immune tolerance in glioblastoma through the NMDAR/PPARγ signaling axis
doi: 10.1038/s41467-023-37170-z
Figure Lengend Snippet: a Macrophages obtained from C57BL/6 mice were polarized towards the M2 phenotype ±QA (20 µM) or the PPARγ agonist troglitazone (Trog; 5 µM) and evaluated for the indicated proteins by western blot, which is representative of three biologically independent experiments. b Macrophages obtained from C57BL/6 mice were polarized towards the M2 phenotype ±Trog ( n = 5), GW9662 (PPARγ antagonist; n = 3) and/or QA (20 µM; n = 5) and analyzed for M2 macrophage markers (CD45 + CD11b + F4/80 + CD206 + ) by flow cytometry. All samples were biologically independent. Numbers represent mean ± SD. c PPARγ transcriptional activity was evaluated in the murine macrophage cell line IC-21 polarized towards the M2 phenotype ±siRNA of indicated proteins by PPARγ transcriptional activity ELISA ( n = 5 biologically independent samples). d C57BL/6 mouse-derived macrophages were polarized towards the M2 phenotype ±QA (20 µM) and evaluated for the indicated proteins by western blot, which is representative of 3 biologically independent experiments. e Macrophages were cultured in the presence or absence of QA ± the Foxo1 inhibitor AS-1842856 (0.1 µM) and evaluated for M2 macrophage markers (CD45 + CD11b + F4/80 + CD206 + ) by flow cytometry. Numbers represent mean ± SD ( n = 4 biologically independent samples/group). f Chromatin immunoprecipitation (ChIP) was performed on C57BL/6 mouse-derived macrophages polarized towards the M2 phenotype and evaluated alone (gray), with QA (red) or with Trog (blue). ChIP was performed using antibodies against PPARγ, Foxo1, and histone 3 (positive control), and IgG antibody (negative control). After IP and DNA purification, the PPARγ exon (202 bp in length) was analyzed using qPCR and gel electrophoresis. Box plots represent interquartile range, line between the data points represents mean, and whiskers represents SE ( n = 4 biologically independent samples/group). Statistics: One-way ANOVA followed by Tukey’s multiple comparisons test ( b , c ), two-tailed Student’s t -test ( e , f ). All tests were performed at 95% confidence interval. Source data are provided as a source data file.
Article Snippet: Chromatin was sonicated and then incubated with a polyclonal antibody against PPARγ (81B8 and C26H12) or FoxO1 (C29H4) Cell Signaling Technology (Danvers, MA) for immunoprecipitation.
Techniques: Western Blot, Flow Cytometry, Activity Assay, Enzyme-linked Immunosorbent Assay, Derivative Assay, Cell Culture, Chromatin Immunoprecipitation, Positive Control, Negative Control, DNA Purification, Nucleic Acid Electrophoresis, Two Tailed Test